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biozentrum university basel
Research Associate / Bioinformaticianbiozentrum university basel • Basel, CH
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Research Associate / Bioinformatician

Research Associate / Bioinformatician

biozentrum university basel • Basel, CH
Vor 3 Tagen
Stellenbeschreibung

Your position

  • Analyze large-scale retinal imaging datasets (e.g. OCT, fundus photography) using deep-learning-derived imaging features
  • Develop and validate statistical and machine learning models of disease progression
  • Build patient stratification and phenotyping pipelines
  • Collaborate with clinicians to translate computational findings into clinical trial design, patient selection criteria, and endpoint development
  • Contribute to the group's publication output and present findings at international conferences

Your profile

Minimum qualifications:

  • MSc or PhD in computational biology, bioinformatics, computer science, biomedical engineering, physics, statistics, or a related quantitative field
  • Strong Python programming skills and experience developing reproducible data-analysis workflows
  • Experience working with complex, high-dimensional biomedical or imaging datasets, including data quality control and validation
  • Ability to explain technical methods and results clearly to both computational and clinical collaborators
  • Evidence of independent quantitative research, such as a thesis, publication, preprint, software project, or substantial analytical contribution


Preferred qualifications:

  • Experience with medical image analysis, retinal imaging, or ophthalmic data
  • Experience with survival analysis frameworks, mixed-effects modeling, or Bayesian approaches to disease progression
  • Experience with representation learning and generative or temporal modelling in learned representation spaces, for example using diffusion models, latent-variable models, or neural state-space models
  • Experience with statistical modelling or machine learning applied to longitudinal, repeated-measures, or time-to-event data
  • Experience with high-dimensional data analysis (e.g. embeddings, single-cell, or omics data), including dimensionality reduction, clustering, and phenotyping
Jobalert für diese Suche erstellen

Research Associate / Bioinformatician • Basel, CH